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TOP > About the Species(Nicotiana tabacum var. TN90) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Nicotiana tabacum

CDS Sequence

CDS ID

lcl|NW_015853108.1_cds_XP_016512105.1_24781
CDS Infomation

[gene=LOC107829159] [db_xref=GeneID:107829159] [protein=polycomb group protein EMBRYONIC FLOWER 2-like isoform X3] [protein_id=XP_016512105.1] [location=complement(join(1215..1338,1844..1933,3041..3120,5032..5115,23124..23172,24237..24402,28917..29038,29141..29187,29615..29674,29760..29813,29958..30010,30654..30718,31528..31649,31759..31821,34300..34439,35524..35565,35647..35806,35891..36008,37175..37230,37689..37814))] [gbkey=CDS]
Sequence

ATGTGCAGGCAAGATTCTGCTACACATTTGTCTGCAGAGGAGAAGATTGCTGCTGAAGAA
AGCCTTTCGACTTATTGCAAACCTGTTGAACTCTACAACATTCTCCAACGCCGTGCCGTT
AGAAATCCTTCCTTCCTTCAAAGATGTTTACAATACAAAATTCAAGCAAAGCACAAAAGG
AGGATTCAAATGGCAATATCTGTACCAGCAACTGTGAACGATGAATCACAGGTCCAGAAT
GTTTTTCCTCTGTGTGTAATCTTGGCAAGGCCAGTATCAAATGCTGCAGGTGCTGAGGCA
AATTCTGATGTCTATCAATTTAGGCGGGCATGCATATCAACTTCTTTCACTGGAGTTGAT
GGAATAAATCGAGTTCAAGCAAAATTCTTTCTCCCTGAAATGGATAAACTTTCAGCTGAA
ACAAGGGCGGGGTCTCTTGTCATCCTGTTTGTCAGCTTTGCTGAACTTGCTAGAGATCAT
TTGGATACATTTTCATTTCCATTGCATCTTGAAGGGCACTTCTTGTTGGGAAGAATGCCG
ATTGAATTACTTCATCTATTGTGGGAAAAGTCTCCCAACTTGAGTTTAGGGGAGAGAGCT
GAGATGTTGTCAACTGTTGACTTGAGCCCTTGTTTTATGAAGACAAACTGTTTGGACAAA
GACATACATATTTCCTTGCAGTATCCTTGCAGTTCTGTGGCTCTGGCAACAATACAACAA
CTGCAAGTCAAAATTGCTGCAGAAGAAGCAGGTGCTGGAGAAAAATCAACTTATGATTCA
TTCTCCTATGATGACATTTCTATGACTTCATTGCCTCGAATAATACGGTTGAGGACAGGA
AATGTTGTCTTCAACTATAGGTACTATAACAACAAGTTGCAGAGAACAGAAGTGACTGAG
GACTTCACATGTCCTCTCTGCTTGGTAAAATGTGCCAGCTTTAAGGGTTTGAGATATCAC
TTATGCTCATCTCACGATTTGTTCAACTTTGAATTTTGGGTAAATGAAGAATATCAAGCT
GTAAATGTATCTGTGAGAACTGACATGGGGAGATCTGAGATTGTTGCTAATGGCGTTGAT
CCTAAGCAACAAACATTCTTCTTTTGTTCAAAGCCACTAAGACGGAGGAAACAACAGAAT
TTAGTTCAAAATTCAAAGTATGTGCACCCACTTGTTTTAGATTCAGATTTTCCTACATCA
ACGAATGGGATCAATGACAAGATTAATGGCATTGCTGAGGCTGTAGAGTGTGATCCATCA
AGTCCCAATGGTGCGGGCGTTTCCTCTGCAACTGGTCACTTGTATCCAGATCCTGACTCT
GTGCAATCAGTACCAGGAAGCACCCTTGCACCCAAGTCAAGAAAGGTTTCAGTTGAGCGC
TCTGATCCCAGAAATCGTGCACTCCTGCAAAAAAGGCAATTCTTTCATTCTCATAGAGCC
CAGCCCATGGCACTGGAGCAAGTTTTATCAGATCGAGACAGCGAGGATGAAGTTGATGAT
GATGTTGCAGATCTGGAAGATCGAAGGATGCTTGATGATTTTGTGGATGTTACCAAAGAT
GAGAAGCAAATGATGCATCTGTGGAACTCATTTGTTAGAAAGCAAAGGGTGTTGGCAGAT
GGTCACATTCCTTGGGCATGTGAGGCTTTTTCAAAGCTGCATGGTGAGGAGTTCGCCCGA
GCACCGGCCTTGTTGTGGTACTGGAGATTATTCATGACCAAACTGTGGAACCATGGTCTT
ATTGAAGCGCGTGGAATCAACAATTGTAACCTAATACTAGAGCAATTCCAAAGCCAAGAC
AATGATTCTACTAGAAGCTGA

Peptide Sequence

PEP ID

XP_016512105.1
PEP Infomation

PREDICTED: polycomb group protein EMBRYONIC FLOWER 2-like isoform X3 [Nicotiana tabacum]
Sequence

MCRQDSATHLSAEEKIAAEESLSTYCKPVELYNILQRRAVRNPSFLQRCLQYKIQAKHKR
RIQMAISVPATVNDESQVQNVFPLCVILARPVSNAAGAEANSDVYQFRRACISTSFTGVD
GINRVQAKFFLPEMDKLSAETRAGSLVILFVSFAELARDHLDTFSFPLHLEGHFLLGRMP
IELLHLLWEKSPNLSLGERAEMLSTVDLSPCFMKTNCLDKDIHISLQYPCSSVALATIQQ
LQVKIAAEEAGAGEKSTYDSFSYDDISMTSLPRIIRLRTGNVVFNYRYYNNKLQRTEVTE
DFTCPLCLVKCASFKGLRYHLCSSHDLFNFEFWVNEEYQAVNVSVRTDMGRSEIVANGVD
PKQQTFFFCSKPLRRRKQQNLVQNSKYVHPLVLDSDFPTSTNGINDKINGIAEAVECDPS
SPNGAGVSSATGHLYPDPDSVQSVPGSTLAPKSRKVSVERSDPRNRALLQKRQFFHSHRA
QPMALEQVLSDRDSEDEVDDDVADLEDRRMLDDFVDVTKDEKQMMHLWNSFVRKQRVLAD
GHIPWACEAFSKLHGEEFARAPALLWYWRLFMTKLWNHGLIEARGINNCNLILEQFQSQD
NDSTRS

Transcript Sequence

Gene sequence data has not been registered.